Abstract: Temporal network is a basic tool for representing complex systems, such as communication networks and social networks; besides the temporal motif (TM) plays ...
We considered two general issues in revisiting the evaluation criteria. The first is that, ideally, a representation of DNA sequence preference (e.g., a PWM) should output a number that reflects ...
We developed an efficient and accurate computational framework, RABIT (regression analysis with background integration), and comprehensively integrated public transcription factor (TF)-binding ...
1 Courant Institute of Mathematical Sciences, Department of Computer Science, New York University, New York, United States 2 Center for Genomics and Systems Biology, Department of Biology, New York ...
Using Network-Based Machine Learning to Predict Transcription Factors Involved in Drought Resistance
Gene regulatory networks underpin stress response pathways in plants. However, parsing these networks to prioritize key genes underlying a particular trait is challenging. Here, we have built the Gene ...
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